C2G38_2150457 protein (Gigaspora rosea) - STRING interaction network

Nodes:

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second shell of interactors

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filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

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[Homology]

Score

C2G38_2150457

Uncharacterized protein. (331 aa)

Predicted Functional Partners:

C2G38_2038825

0.887

C2G38_2133732

0.851

C2G38_2174300

0.851

C2G38_2109223

0.833

C2G38_1971167

0.833

C2G38_1951273

0.833

C2G38_514818

0.817

C2G38_1971345

0.800

C2G38_2229129

0.775

C2G38_1971804

0.775

Your Current Organism:

Gigaspora rosea

NCBI taxonomy Id: 44941
Other names: G. rosea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C2G38_1951273	C2G38_1971345	A0A397WAS6	A0A397V2A4	Uncharacterized protein.	HSP20-like chaperone.	0.479
C2G38_1951273	C2G38_2038825	A0A397WAS6	A0A397V3D5	Uncharacterized protein.	HSP20-like chaperone.	0.664
C2G38_1951273	C2G38_2109223	A0A397WAS6	A0A397UPW8	Uncharacterized protein.	SGS domain-containing protein.	0.500
C2G38_1951273	C2G38_2133732	A0A397WAS6	A0A397TRC6	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.597
C2G38_1951273	C2G38_2150457	A0A397WAS6	A0A397U209	Uncharacterized protein.	Uncharacterized protein.	0.833
C2G38_1951273	C2G38_2174300	A0A397WAS6	A0A397VKE8	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase D.	0.597
C2G38_1951273	C2G38_514818	A0A397WAS6	A0A397VWA8	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.503
C2G38_1971167	C2G38_2150457	A0A397V0D3	A0A397U209	Rap-GAP domain-containing protein.	Uncharacterized protein.	0.833
C2G38_1971345	C2G38_1951273	A0A397V2A4	A0A397WAS6	HSP20-like chaperone.	Uncharacterized protein.	0.479
C2G38_1971345	C2G38_2109223	A0A397V2A4	A0A397UPW8	HSP20-like chaperone.	SGS domain-containing protein.	0.961
C2G38_1971345	C2G38_2150457	A0A397V2A4	A0A397U209	HSP20-like chaperone.	Uncharacterized protein.	0.800
C2G38_1971804	C2G38_2038825	A0A397V7T1	A0A397V3D5	HSF-type DNA-binding-domain-containing protein.	HSP20-like chaperone.	0.975
C2G38_1971804	C2G38_2150457	A0A397V7T1	A0A397U209	HSF-type DNA-binding-domain-containing protein.	Uncharacterized protein.	0.775
C2G38_1971804	C2G38_2229129	A0A397V7T1	A0A397TV26	HSF-type DNA-binding-domain-containing protein.	HSF-type DNA-binding-domain-containing protein.	0.682
C2G38_1971804	C2G38_514818	A0A397V7T1	A0A397VWA8	HSF-type DNA-binding-domain-containing protein.	TPR_REGION domain-containing protein.	0.673
C2G38_2038825	C2G38_1951273	A0A397V3D5	A0A397WAS6	HSP20-like chaperone.	Uncharacterized protein.	0.664
C2G38_2038825	C2G38_1971804	A0A397V3D5	A0A397V7T1	HSP20-like chaperone.	HSF-type DNA-binding-domain-containing protein.	0.975
C2G38_2038825	C2G38_2109223	A0A397V3D5	A0A397UPW8	HSP20-like chaperone.	SGS domain-containing protein.	0.536
C2G38_2038825	C2G38_2133732	A0A397V3D5	A0A397TRC6	HSP20-like chaperone.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.971
C2G38_2038825	C2G38_2150457	A0A397V3D5	A0A397U209	HSP20-like chaperone.	Uncharacterized protein.	0.887

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Network Stats

number of nodes:

11

number of edges:

53

average node degree:

9.64

avg. local clustering coefficient:

0.968

expected number of edges:

15

PPI enrichment p-value:

6.29e-14

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0007005

Mitochondrion organization

8 of 128

1.67

3.21

5.47e-10

GO:0033108

Mitochondrial respiratory chain complex assembly

3 of 34

1.82

1.14

0.0071

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005758

Mitochondrial intermembrane space

4 of 29

2.02

2.36

2.52e-05

GO:0005740

Mitochondrial envelope

6 of 226

1.3

1.49

2.52e-05

GO:0005739

Mitochondrion

8 of 604

1.0

1.02

2.52e-05

GO:0070013

Intracellular organelle lumen

6 of 651

0.84

0.62

0.0054

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:7148

Mixed, incl. CHCH domain, and Respiratory chain complex IV assembly

6 of 17

2.42

5.31

6.97e-11

CL:7149

Mixed, incl. CHCH domain, and Thiol oxidase activity

5 of 12

2.5

4.73

1.81e-09

CL:7065

Mitochondrial protein import, and Mitochondrial membrane organization

7 of 60

1.94

4.17

1.32e-10

CL:7153

CHCH domain, and Tim10-like

3 of 5

2.65

2.7

2.01e-05

CL:6814

Oxidative phosphorylation, and Mitochondrion organization

8 of 187

1.51

2.63

1.32e-09

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-1268020

Mitochondrial protein import

6 of 32

2.15

4.28

1.52e-09

MAP-9609507

Protein localization

6 of 125

1.56

2.17

1.66e-06

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0005758

Mitochondrial intermembrane space

4 of 21

2.16

2.56

1.47e-05

GOCC:0000262

Mitochondrial chromosome

2 of 2

2.88

1.74

0.0011

GOCC:0005740

Mitochondrial envelope

5 of 180

1.32

1.29

0.00034

GOCC:0005739

Mitochondrion

7 of 446

1.07

1.1

5.00e-05

GOCC:0070013

Intracellular organelle lumen

6 of 528

0.93

0.76

0.0016

(more ...)

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF06747

CHCH domain

3 of 5

2.65

2.43

6.13e-05

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR010625

CHCH

3 of 5

2.65

2.15

0.00019

IPR009069

Cysteine alpha-hairpin motif superfamily

2 of 6

2.4

0.79

0.0447

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