STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1988562RHOMBOID-like protein. (361 aa)    
Predicted Functional Partners:
C2G38_1921766
LEA_2 domain-containing protein.
    
 0.777
C2G38_2075919
Prohibitin.
    
 0.663
C2G38_2148492
PHB domain-containing protein.
    
 0.620
C2G38_2132551
PHB domain-containing protein.
    
 0.620
C2G38_1967460
Prohibitin.
    
 0.620
C2G38_2151687
Uncharacterized protein.
    
 0.620
C2G38_2308301
Uncharacterized protein.
    
 0.620
C2G38_2308289
Uncharacterized protein.
    
 0.620
C2G38_2255775
DNA polymerase.
 
      0.524
C2G38_2007217
Peptidase family M41-domain-containing protein.
     
 0.519
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.