Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C2G38_2120978Autophagy-related protein 17. (456 aa)    
Predicted Functional Partners:
C2G38_2199556
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
    
 0.996
C2G38_1630992
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.996
C2G38_2317662
Kinase-like domain-containing protein.
   
 
 0.967
C2G38_105464
Autophagy-related protein 11-domain-containing protein.
    
 0.963
C2G38_105468
Uncharacterized protein.
    
 0.963
C2G38_1992123
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
    
 
 0.944
C2G38_2214928
Kinase-like domain-containing protein.
   
 
 0.930
C2G38_2156756
WD40-repeat-containing domain protein.
    
 
 0.923
C2G38_855877
Uncharacterized protein.
   
   0.908
C2G38_784287
Atg29_N domain-containing protein.
  
 
 0.902
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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