STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2149069Uncharacterized protein. (669 aa)    
Predicted Functional Partners:
C2G38_2087926
Uncharacterized protein.
    
 0.861
C2G38_2255016
Fe/B12 periplasmic-binding domain-containing protein.
   
 0.787
C2G38_2097116
Phorbol-ester/DAG-type domain-containing protein.
   
 0.787
C2G38_1662047
Protein kinase domain-containing protein.
    
 0.715
C2G38_2115343
CYTH-like domain-containing protein.
    
  0.694
C2G38_2204399
FAR1 domain-containing protein.
    
  0.694
C2G38_2169183
Transcriptional regulator of RNA polII, SAGA, subunit-domain-containing protein.
    
  0.694
C2G38_551377
BAG domain-containing protein.
    
  0.694
C2G38_2060455
SANT domain-containing protein.
    
  0.694
C2G38_2110247
Uncharacterized protein.
    
 
 0.639
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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