STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1990250Glycoside Hydrolase Family 24 protein. (160 aa)    
Predicted Functional Partners:
C2G38_2097414
Mad3/BUB1 homology region 1-domain-containing protein.
   
 
 0.747
C2G38_1696512
Uncharacterized protein.
   
 
  0.717
C2G38_1696487
Uncharacterized protein.
   
 
  0.717
C2G38_1974202
Peptidase family C50-domain-containing protein.
   
 
  0.717
C2G38_1696568
Uncharacterized protein.
   
 
  0.717
C2G38_2132731
WD40-repeat-containing domain protein.
   
 
 0.681
C2G38_1973400
WD40-repeat-containing domain protein.
   
 
 0.681
C2G38_2075868
WD40-repeat-containing domain protein.
   
 
 0.681
C2G38_1007703
Uncharacterized protein.
   
 
 0.681
C2G38_2099684
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.676
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.