Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2127987Csm1 domain-containing protein. (270 aa)    
Predicted Functional Partners:
C2G38_2246648
Kinetochore-associated protein Dsn1/Mis13.
    
 
 0.932
C2G38_2044669
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
    
 
 0.880
C2G38_2118048
ULP_PROTEASE domain-containing protein.
    
 
 0.879
C2G38_276621
Man1-Src1p-C-terminal domain-containing protein.
    
 
 0.856
C2G38_1988471
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.786
C2G38_2144805
Mif2/CENP-C like-domain-containing protein.
    
 
 0.775
C2G38_2207555
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
    
 
 0.766
C2G38_2072898
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
    
 
 0.766
C2G38_1979229
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.699
C2G38_2192922
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.683
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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