STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1988330NOT2_3_5 domain-containing protein. (311 aa)    
Predicted Functional Partners:
C2G38_1992436
CCR4-Not complex component, Not1-domain-containing protein.
   
 0.988
C2G38_2006875
Not1 N-terminal domain, CCR4-Not complex component-domain-containing protein.
    
0.987
C2G38_1968258
Ribonuclease H-like domain-containing protein.
   
 0.975
C2G38_1958446
Uncharacterized protein.
    
 0.973
C2G38_2041895
Endonuclease/exonuclease/phosphatase.
    
 0.967
C2G38_2039707
Uncharacterized protein.
    
 0.950
C2G38_1950732
RING/Ubox like zinc-binding domain-containing protein.
    
 0.937
C2G38_1226205
Uncharacterized protein.
    
 0.905
C2G38_2131020
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.887
C2G38_542961
RING-CH-type domain-containing protein.
    
 
 0.885
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.