Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C2G38_1990530DNA_pol_B domain-containing protein. (235 aa)    
Predicted Functional Partners:
C2G38_2016176
DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.
   
 0.965
C2G38_1977270
DNA polymerase alpha/epsilon subunit B-domain-containing protein.
   
 0.959
C2G38_2105025
DNA helicase; Belongs to the MCM family.
   
 0.954
C2G38_2132970
DNA helicase; Belongs to the MCM family.
   
 0.946
C2G38_2112181
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.946
C2G38_1999729
DNA helicase; Belongs to the MCM family.
   
 0.928
C2G38_2148573
CDC45 family.
   
 0.927
C2G38_2092817
DNA helicase; Belongs to the MCM family.
   
 0.927
C2G38_1969511
DNA helicase.
   
 0.917
MCM7
DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]
   
 0.910
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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