Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1919476Transcriptional Coactivator p15-domain-containing protein. (73 aa)    
Predicted Functional Partners:
C2G38_2128194
Symplekin tight junction protein C terminal-domain-containing protein.
    
 
 0.895
C2G38_2012223
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 
 0.883
C2G38_1992439
Cyclin-like protein.
    
 
 0.852
C2G38_1950537
Cyclin-like protein.
    
 
 0.852
C2G38_2251141
DNA-directed RNA polymerase.
   
 
 0.845
C2G38_2131958
Pumilio 2.
    
   0.819
C2G38_2174554
Translation machinery associated TMA7.
   
    0.803
C2G38_2229244
TFIIB domain-containing protein.
    
 
 0.779
C2G38_721175
Cwf21 domain-containing protein.
   
   0.777
C2G38_2187175
DNA breaking-rejoining enzyme.
   
 
 0.707
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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