Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2222100t-SNARE coiled-coil homology domain-containing protein. (87 aa)    
Predicted Functional Partners:
C2G38_2024331
t-SNARE; Belongs to the syntaxin family.
   
 0.995
C2G38_2210395
t-SNARE.
   
 0.994
C2G38_2032422
Synaptobrevin-like protein ykt6; Belongs to the synaptobrevin family.
    
 0.991
C2G38_2131973
Synaptobrevin-domain-containing protein.
    
 0.990
C2G38_2039249
Synaptobrevin-domain-containing protein.
    
 0.982
C2G38_14213
Soluble NSF attachment protein.
    
 0.979
C2G38_2119654
t-SNARE.
    
 0.972
C2G38_1949642
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.964
C2G38_2097416
Longin-like domain-containing protein; Belongs to the synaptobrevin family.
    
 
 0.963
C2G38_2248011
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.962
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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