Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2008609Piwi domain-containing protein; Belongs to the argonaute family. (872 aa)    
Predicted Functional Partners:
C2G38_1988886
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
    
 0.739
C2G38_2122393
Putative nonsense-mediated mRNA decay protein.
    
 0.616
C2G38_2014191
Translin.
    
 0.571
C2G38_2209520
Ribonuclease III domain-containing protein.
    
 0.545
C2G38_2097821
Ribonuclease III domain-containing protein.
    
 0.545
C2G38_2159732
Ribonuclease III domain-containing protein.
    
 0.545
C2G38_2085191
HABP4_PAI-RBP1 domain-containing protein.
    
 
 0.533
C2G38_2039348
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
    
 
 0.531
C2G38_1568630
Arb2 domain-containing protein.
    
 
 0.521
C2G38_1061502
Arb2 domain-containing protein.
    
 
 0.521
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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