STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1990026P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family. (232 aa)    
Predicted Functional Partners:
C2G38_2081161
Pex19 protein family-domain-containing protein.
    
 0.857
C2G38_2050738
NPL4 family-domain-containing protein.
    
 0.834
C2G38_1052170
Ubiquitin fusion degradation protein 1.
   
 0.826
C2G38_2221150
Peroxin 13, N-terminal region-domain-containing protein.
    
 0.826
C2G38_219731
Snf7-domain-containing protein.
    
 0.825
C2G38_344749
Thioredoxin-like protein.
    
 0.825
C2G38_2250167
Ubiquitin-like domain-containing protein.
    
 0.818
C2G38_1119682
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.818
C2G38_245547
Ubiquitin-related domain-containing protein.
   
  0.816
C2G38_14213
Soluble NSF attachment protein.
    
 0.816
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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