STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_707804Pyridoxal phosphate-dependent transferase. (380 aa)    
Predicted Functional Partners:
C2G38_2221548
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 0.998
C2G38_2136018
Uncharacterized protein.
    
 0.984
C2G38_2134719
Scaffold protein Nfu/NifU.
  
 0.961
C2G38_1972633
Uncharacterized protein; Belongs to the complex I LYR family.
    
 0.948
C2G38_2165312
Uncharacterized protein.
    
 0.948
C2G38_2244471
Ferredoxin.
  
 0.942
C2G38_2031164
Rhodanese-like domain-containing protein.
   
 0.883
C2G38_1984176
Co-chaperone HscB, C-terminal oligomerization domain-containing protein.
  
 
 0.878
C2G38_2209742
Cytosol aminopeptidase.
  
 
 0.857
C2G38_2067840
Rhodanese-like domain-containing protein.
   
 0.856
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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