Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2216025Uncharacterized protein. (263 aa)    
Predicted Functional Partners:
C2G38_2131496
PIN domain-like protein.
   
 0.788
C2G38_1406066
DNA replication factor Dna2-domain-containing protein.
   
 0.764
C2G38_1972122
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
    
 0.735
C2G38_2091790
RPA_C domain-containing protein.
   
 0.734
C2G38_1742818
DUF1767 domain-containing protein.
    
 0.731
C2G38_2255452
AAA domain-containing protein.
   
 0.723
C2G38_1967981
Replication factor RFC1 C terminal domain-containing protein.
   
 0.722
C2G38_23972
Metallo-dependent phosphatase-like protein; Belongs to the MRE11/RAD32 family.
   
 0.716
C2G38_2065855
Rad17 cell cycle checkpoint protein.
   
 0.716
C2G38_1245129
DNA recombination and repair protein Rad51.
   
 0.709
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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