Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2150401Vacuolar protein sorting 25. (183 aa)    
Predicted Functional Partners:
C2G38_1466134
Uncharacterized protein.
   
 0.998
C2G38_2132073
Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.995
C2G38_129791
Snf7-domain-containing protein.
   
 0.994
C2G38_2113188
Snf7 family.
    
 0.993
C2G38_411708
UEV domain-containing protein.
   
 0.990
C2G38_2143472
VPS37 C-terminal domain-containing protein.
    
 0.988
C2G38_1582159
EAP30/Vps36 family-domain-containing protein.
   
 0.987
C2G38_1971748
Putative vacuolar protein-sorting-associated protein 36.
   
 0.987
C2G38_2052388
Charged multivesicular body protein 2a.
   
 0.983
C2G38_2228553
Snf7-domain-containing protein.
    
 0.948
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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