Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_792879Uncharacterized protein. (496 aa)    
Predicted Functional Partners:
C2G38_1960902
Uncharacterized protein.
    
 0.995
C2G38_2231320
Histone acetyltransferases subunit 3-domain-containing protein.
    
 0.903
C2G38_1990814
Transcription initiation factor IID, 31kD subunit-domain-containing protein.
   
 0.903
C2G38_2150118
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 0.903
C2G38_714187
Transcription initiation factor TFIID subunit A-domain-containing protein.
    
 0.870
C2G38_2133367
Transcription initiation factor IID, 18kD subunit-domain-containing protein.
    
 0.870
C2G38_1972287
WD40-repeat-containing domain protein.
    
 0.865
C2G38_2216499
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.829
C2G38_254021
Uncharacterized protein.
    
 0.829
C2G38_1940071
Putative TAF10-TFIID and SAGA subunit.
    
 0.825
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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