Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_644135CBFD_NFYB_HMF domain-containing protein. (234 aa)    
Predicted Functional Partners:
C2G38_2102122
Histone-fold-containing protein.
    
 0.992
C2G38_2179250
Histone-fold-containing protein.
   
 0.971
C2G38_1914070
CCAAT-binding transcription factor, subunit B.
    
 0.944
C2G38_1902752
CCAAT-binding transcription factor, subunit B.
    
 0.944
C2G38_2132522
SNF2 family N-terminal domain-containing protein.
    
 0.885
C2G38_2112181
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.861
C2G38_1973994
DNA polymerase alpha/epsilon subunit B-domain-containing protein.
     
 0.815
C2G38_2139717
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
     
 0.815
C2G38_2230605
DNA polymerase delta, subunit 4-domain-containing protein.
     
  0.800
C2G38_1987655
Uncharacterized protein.
     
  0.800
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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