Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1989741Uncharacterized protein. (2481 aa)    
Predicted Functional Partners:
C2G38_2141968
Uncharacterized protein.
   
 0.925
C2G38_1975328
Autophagy-related protein.
    
 0.887
C2G38_1392992
Uncharacterized protein.
   
 0.862
C2G38_2245785
Uncharacterized protein.
   
 0.855
C2G38_1878618
Uncharacterized protein.
   
  0.838
C2G38_1976192
Endonuclease/exonuclease/phosphatase.
     
 0.820
C2G38_1988266
Ubiquitin and ribosomal protein S27a-like protein.
    
  0.802
C2G38_2246740
Uncharacterized protein.
    
  0.801
C2G38_2132202
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.749
C2G38_2080366
Uncharacterized protein; Belongs to the FGGY kinase family.
    
 0.746
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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