Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2119478Uncharacterized protein. (1294 aa)    
Predicted Functional Partners:
C2G38_2009091
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.718
C2G38_1981462
Small GTPase superfamily.
    
 0.718
C2G38_1984319
Putative small G-protein Ras1.
    
 0.718
C2G38_2135071
Ras-2.
    
 0.718
C2G38_2004881
Small GTPase superfamily.
    
 0.718
C2G38_2200805
Putative small G-protein Ras1.
    
 0.718
C2G38_1974935
Ras related protein 1b.
    
 0.718
C2G38_1972906
Small GTPase superfamily.
    
 0.718
C2G38_2180324
Ras-like protein.
    
 0.718
C2G38_2245370
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.718
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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