STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1989621Homeobox domain-containing protein. (79 aa)    
Predicted Functional Partners:
C2G38_1960912
MADS-box domain-containing protein.
    
 0.738
C2G38_1924483
MADS-box domain-containing protein.
    
 0.738
C2G38_2049666
GATA-type domain-containing protein.
    
 0.683
C2G38_2087926
Uncharacterized protein.
    
 0.667
C2G38_1972401
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
    
  0.617
C2G38_2162321
Cyclin-like protein; Belongs to the cyclin family.
     
 0.578
C2G38_2109083
Uncharacterized protein.
    
 
 0.559
C2G38_2082850
Uncharacterized protein.
    
 
 0.526
C2G38_1893102
Uncharacterized protein.
    
 0.517
C2G38_2252839
GATA-type domain-containing protein.
    
 0.517
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.