Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_623561Dbl homology domain-containing protein. (235 aa)    
Predicted Functional Partners:
C2G38_1989349
RWD domain-containing protein.
     
  0.751
C2G38_1991421
G domain-containing protein.
    
 0.747
C2G38_2049808
RING-type domain-containing protein.
    
 0.747
C2G38_438442
RING-type domain-containing protein.
    
 0.747
C2G38_341460
Uncharacterized protein.
    
 0.747
C2G38_146450
Uncharacterized protein.
    
 0.747
C2G38_2029122
G domain-containing protein.
    
 0.747
C2G38_2103729
DH domain-containing protein.
    
 0.730
C2G38_2047921
Uncharacterized protein.
    
 0.677
C2G38_2131747
P-loop containing nucleoside triphosphate hydrolase protein.
  
 
 0.644
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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