Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2228645Uncharacterized protein. (148 aa)    
Predicted Functional Partners:
C2G38_2046348
Mitochondrial 39-S ribosomal protein L47 (MRP-L47)-domain-containing protein.
    
 
 0.952
C2G38_258436
Uncharacterized protein.
  
 
 0.952
C2G38_2177476
FtsJ-like methyltransferase-domain-containing protein.
   
 
 0.943
C2G38_2134278
Translation protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.919
C2G38_2187569
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.899
C2G38_2253519
Obg family GTPase CgtA.
   
 
 0.891
C2G38_2214642
Uncharacterized protein.
    
   0.884
C2G38_2214239
Ribosomal protein L13-domain-containing protein.
    
   0.884
C2G38_135268
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
    
   0.884
C2G38_1128270
Ribosomal protein L10e/L16; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.881
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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