STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2150118Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. (464 aa)    
Predicted Functional Partners:
C2G38_2231320
Histone acetyltransferases subunit 3-domain-containing protein.
    
 0.999
C2G38_1990814
Transcription initiation factor IID, 31kD subunit-domain-containing protein.
    
 0.998
C2G38_2133367
Transcription initiation factor IID, 18kD subunit-domain-containing protein.
    
 0.996
C2G38_714187
Transcription initiation factor TFIID subunit A-domain-containing protein.
    
 0.995
C2G38_1972287
WD40-repeat-containing domain protein.
    
 0.990
C2G38_2216499
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.980
C2G38_254021
Uncharacterized protein.
    
 0.980
C2G38_1886860
Ubiquitin carboxyl-terminal hydrolase.
    
 0.979
C2G38_1940071
Putative TAF10-TFIID and SAGA subunit.
    
 0.979
C2G38_2048126
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.979
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.