Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2133243Uncharacterized protein. (210 aa)    
Predicted Functional Partners:
C2G38_2003608
WD_REPEATS_REGION domain-containing protein.
    
 
 0.858
C2G38_1992282
BRO1-like domain-containing protein.
    
 
 0.789
C2G38_1992288
BRO1 domain-containing protein.
    
 
 0.789
C2G38_2044669
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
    
 0.757
C2G38_2207555
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
    
 0.757
C2G38_2072898
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
    
 0.757
C2G38_411708
UEV domain-containing protein.
   
 
 0.696
C2G38_2202517
Uncharacterized protein.
    
 
 0.647
C2G38_2037512
BRO1-like domain-containing protein.
    
 
 0.647
C2G38_1993671
AA_TRNA_LIGASE_II domain-containing protein.
    
   0.630
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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