Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C2G38_694832RNA polymerase III RPC4-domain-containing protein. (286 aa)    
Predicted Functional Partners:
C2G38_488992
Sin-like protein conserved region-domain-containing protein.
   
 0.998
C2G38_2233595
DNA-directed RNA polymerase.
   
 0.996
C2G38_1991036
RNA polymerase I.
   
 0.996
C2G38_463161
DNA-directed RNA polymerases I and III subunit RPAC1-like protein.
   
 0.996
C2G38_2201028
DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.
   
 0.996
C2G38_2049022
RNA polymerase Rpc34.
   
 0.995
C2G38_2061411
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.995
C2G38_2042709
RNA polymerase Rpb4-domain-containing protein.
   
 0.994
C2G38_1972823
DNA-directed RNA polymerase, subunit RPB6.
   
 0.994
C2G38_2135992
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.993
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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