Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C2G38_2118048ULP_PROTEASE domain-containing protein. (272 aa)    
Predicted Functional Partners:
C2G38_2057689
Ubiquitin-like protein pmt3/smt3.
   
 0.985
C2G38_2112874
ULP_PROTEASE domain-containing protein.
   
 0.975
C2G38_652266
ULP_PROTEASE domain-containing protein.
   
 0.957
C2G38_1976471
Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.935
C2G38_1985354
Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.
    
 
 0.934
C2G38_2133095
WLM domain-containing protein.
    
 
 0.894
C2G38_2255150
Uncharacterized protein.
    
 
 0.887
C2G38_2127987
Csm1 domain-containing protein.
    
 
 0.879
C2G38_790466
Serine/threonine-protein kinase.
    
 
 0.872
C2G38_2139613
PINIT domain-containing protein.
    
 
 0.864
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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