Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_681351Uncharacterized protein. (314 aa)    
Predicted Functional Partners:
C2G38_1960902
Uncharacterized protein.
    
 0.900
C2G38_2049666
GATA-type domain-containing protein.
    
 0.888
C2G38_2132695
Actin family; Belongs to the actin family.
    
 0.824
C2G38_2098127
Putative brg-1 associated factor.
    
 0.823
C2G38_2007116
Uncharacterized protein.
   
 0.818
C2G38_1987691
Bromodomain-containing protein.
    
 0.756
C2G38_2232613
GATA-type domain-containing protein.
    
 0.746
C2G38_2219340
Uncharacterized protein.
    
 0.740
C2G38_798485
DEK_C domain-containing protein.
    
 0.677
C2G38_1914785
Uncharacterized protein.
    
 0.676
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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