Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C2G38_2125062Uncharacterized protein. (176 aa)    
Predicted Functional Partners:
C2G38_1999176
Isoprenoid synthase domain-containing protein; Belongs to the FPP/GGPP synthase family.
    
 0.769
C2G38_2256229
Decaprenyl diphosphate synthase-like protein.
    
  0.755
C2G38_1981813
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
    
  0.749
C2G38_2256366
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
     
  0.746
C2G38_2254691
Uncharacterized protein.
     
  0.746
C2G38_1971364
Farnesyl-diphosphate farnesyltransferase.
     
  0.746
C2G38_1992772
Alkyl transferase; Belongs to the UPP synthase family.
    
  0.681
C2G38_1987359
Alkyl transferase; Belongs to the UPP synthase family.
    
  0.681
C2G38_1978875
Farnesyl-diphosphate farnesyltransferase.
     
  0.669
C2G38_2248561
HAD-like domain-containing protein.
   
 
  0.666
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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