Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C2G38_1988655DUF155 domain-containing protein. (378 aa)    
Predicted Functional Partners:
C2G38_2131958
Pumilio 2.
    
   0.660
C2G38_1986281
SAM-dependent methyltransferase.
    
 
 0.655
C2G38_2068889
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
    
 
 0.655
C2G38_2253519
Obg family GTPase CgtA.
   
  
 0.632
C2G38_2043200
P-loop containing nucleoside triphosphate hydrolase protein.
      
 0.617
C2G38_2074203
WD40-repeat-containing domain protein.
      
 0.614
C2G38_1993284
Sodium/calcium exchanger protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.589
C2G38_1302442
P-loop containing nucleoside triphosphate hydrolase protein.
      
 0.557
C2G38_2016049
Peptide chain release factor 1.
      
 0.504
C2G38_2132012
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.499
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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