Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
C2G38_686924Mitochondrial carrier domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (128 aa)    
Predicted Functional Partners:
C2G38_2224309
60S ribosomal protein L14e.
   
 
 0.873
C2G38_1972423
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.818
C2G38_1977790
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.813
C2G38_2041413
60S ribosomal protein L28.
   
   0.805
C2G38_2079033
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
   0.804
C2G38_2034522
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.804
C2G38_2122194
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.798
C2G38_394958
Ribosomal protein S17-domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.797
C2G38_2133472
Ribosomal protein L5 domain-containing protein; Belongs to the universal ribosomal protein uL5 family.
   
   0.796
C2G38_2135650
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.796
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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