Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1986464WD40-repeat-containing domain protein. (537 aa)    
Predicted Functional Partners:
C2G38_2024531
Chromatin binding protein.
    
 0.982
C2G38_2222102
TPR_REGION domain-containing protein.
    
 0.982
C2G38_2154830
B30.2/SPRY domain-containing protein.
    
 0.982
C2G38_2085193
BZIP domain-containing protein.
    
 0.969
C2G38_1055648
Uncharacterized protein.
    
 0.933
C2G38_1055676
Uncharacterized protein.
    
 0.933
C2G38_1991196
WD40-repeat-containing domain protein.
    
 0.926
C2G38_1986864
WD40-repeat-containing domain protein.
    
 0.926
C2G38_2044926
Uncharacterized protein.
    
 0.924
C2G38_2242937
BZIP domain-containing protein.
    
 0.922
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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