C2G38_2148327 protein (Gigaspora rosea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C2G38_2148327

Snare associated Golgi protein. (393 aa)

Predicted Functional Partners:

C2G38_1980757

0.612

C2G38_2023705

0.591

C2G38_1976120

0.584

C2G38_2179440

0.584

C2G38_2199381

0.580

C2G38_1988503

0.561

C2G38_2254663

0.561

C2G38_2117399

0.503

C2G38_2254155

0.487

C2G38_1987857

0.487

Your Current Organism:

Gigaspora rosea

NCBI taxonomy Id: 44941
Other names: G. rosea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C2G38_1976120	C2G38_1988503	A0A397UT36	A0A397U5M8	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	ATP-NAD kinase-like domain-containing protein.	0.740
C2G38_1976120	C2G38_2023705	A0A397UT36	A0A397UD40	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	0.838
C2G38_1976120	C2G38_2148327	A0A397UT36	A0A397U6G9	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	Snare associated Golgi protein.	0.584
C2G38_1976120	C2G38_2199381	A0A397UT36	A0A397URT9	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.846
C2G38_1976120	C2G38_2254663	A0A397UT36	A0A397UA21	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	ATP-NAD kinase-like domain-containing protein.	0.740
C2G38_1980757	C2G38_1987857	A0A397UKY8	A0A397UBV4	ATP-NAD kinase-like domain-containing protein.	Acyltransferase-domain-containing protein.	0.668
C2G38_1980757	C2G38_2117399	A0A397UKY8	A0A397UFG6	ATP-NAD kinase-like domain-containing protein.	Uncharacterized protein.	0.668
C2G38_1980757	C2G38_2148327	A0A397UKY8	A0A397U6G9	ATP-NAD kinase-like domain-containing protein.	Snare associated Golgi protein.	0.612
C2G38_1980757	C2G38_2254155	A0A397UKY8	A0A397U3T0	ATP-NAD kinase-like domain-containing protein.	Uncharacterized protein.	0.668
C2G38_1987857	C2G38_1980757	A0A397UBV4	A0A397UKY8	Acyltransferase-domain-containing protein.	ATP-NAD kinase-like domain-containing protein.	0.668
C2G38_1987857	C2G38_2117399	A0A397UBV4	A0A397UFG6	Acyltransferase-domain-containing protein.	Uncharacterized protein.	0.718
C2G38_1987857	C2G38_2148327	A0A397UBV4	A0A397U6G9	Acyltransferase-domain-containing protein.	Snare associated Golgi protein.	0.487
C2G38_1988503	C2G38_1976120	A0A397U5M8	A0A397UT36	ATP-NAD kinase-like domain-containing protein.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.740
C2G38_1988503	C2G38_2148327	A0A397U5M8	A0A397U6G9	ATP-NAD kinase-like domain-containing protein.	Snare associated Golgi protein.	0.561
C2G38_1988503	C2G38_2179440	A0A397U5M8	A0A397VMI5	ATP-NAD kinase-like domain-containing protein.	Dihydrolipoyl dehydrogenase.	0.740
C2G38_1988503	C2G38_2254663	A0A397U5M8	A0A397UA21	ATP-NAD kinase-like domain-containing protein.	ATP-NAD kinase-like domain-containing protein.	0.852
C2G38_2023705	C2G38_1976120	A0A397UD40	A0A397UT36	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.838
C2G38_2023705	C2G38_2148327	A0A397UD40	A0A397U6G9	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	Snare associated Golgi protein.	0.591
C2G38_2023705	C2G38_2179440	A0A397UD40	A0A397VMI5	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	Dihydrolipoyl dehydrogenase.	0.954
C2G38_2023705	C2G38_2199381	A0A397UD40	A0A397URT9	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.996