Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1987184Piwi domain-containing protein; Belongs to the argonaute family. (854 aa)    
Predicted Functional Partners:
C2G38_1988886
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
    
 0.902
C2G38_1960022
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.785
C2G38_2049808
RING-type domain-containing protein.
    
 0.765
C2G38_438442
RING-type domain-containing protein.
    
 0.765
C2G38_2122393
Putative nonsense-mediated mRNA decay protein.
    
 0.752
C2G38_2039348
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
    
 
 0.724
C2G38_1061502
Arb2 domain-containing protein.
    
 
 0.702
C2G38_2014191
Translin.
    
 0.686
C2G38_829319
Translin.
    
 0.651
C2G38_2166708
Argonaute siRNA chaperone complex subunit Arb1-domain-containing protein.
    
 
 0.633
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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