Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2218403Uncharacterized protein. (747 aa)    
Predicted Functional Partners:
C2G38_2201615
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
  0.950
C2G38_2299943
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.916
C2G38_2048760
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.865
C2G38_1969511
DNA helicase.
   
    0.859
C2G38_1970017
14-3-3 protein; Belongs to the 14-3-3 family.
    
 
 0.768
C2G38_2033693
14-3-3 1 protein; Belongs to the 14-3-3 family.
    
 
 0.768
C2G38_1960902
Uncharacterized protein.
    
 0.759
C2G38_1916500
Uncharacterized protein.
    
 0.732
C2G38_2078712
MIF4G like-domain-containing protein.
    
 0.718
C2G38_1973988
Nuclear cap-binding protein subunit 2.
    
 0.717
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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