Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2222288Uncharacterized protein. (281 aa)    
Predicted Functional Partners:
C2G38_1960902
Uncharacterized protein.
   
 0.857
C2G38_2087926
Uncharacterized protein.
    
 0.854
C2G38_1978952
Cyclin-like protein; Belongs to the cyclin family.
   
 0.794
C2G38_2074506
Kinase-like domain-containing protein.
    
 0.759
C2G38_2201176
Uncharacterized protein.
   
 0.752
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.721
C2G38_2088901
HORMA domain-containing protein.
   
 0.716
C2G38_196656
Ipi1_N domain-containing protein.
   
 0.715
C2G38_2097414
Mad3/BUB1 homology region 1-domain-containing protein.
    
 0.708
C2G38_1990814
Transcription initiation factor IID, 31kD subunit-domain-containing protein.
    
 0.706
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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