Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2253436Mis12 protein. (231 aa)    
Predicted Functional Partners:
C2G38_2243026
Spc24 subunit of Ndc80-domain-containing protein.
    
 0.752
C2G38_2156746
DASH complex subunit Dad4-domain-containing protein.
    
 0.733
C2G38_2091693
HEC/Ndc80p family-domain-containing protein.
    
 0.698
C2G38_576288
Chromosome segregation protein Spc25-domain-containing protein.
    
 0.669
C2G38_2138917
Chromosome segregation protein Spc25-domain-containing protein.
    
 0.669
C2G38_2203525
Nuf2 family-domain-containing protein.
    
 0.666
C2G38_366101
Acyl transferase/acyl hydrolase/lysophospholipase.
   
 0.633
C2G38_1977218
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.623
C2G38_2205460
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.617
C2G38_1962447
Uncharacterized protein.
    
  0.617
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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