Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_539682Uncharacterized protein. (212 aa)    
Predicted Functional Partners:
C2G38_1992436
CCR4-Not complex component, Not1-domain-containing protein.
    
 0.899
C2G38_2158493
Exosome complex exonuclease RRP43.
    
  0.847
C2G38_1968258
Ribonuclease H-like domain-containing protein.
   
 0.843
C2G38_788355
Uncharacterized protein.
    
 0.779
C2G38_1987820
Putative 5-3 exonuclease.
    
 0.773
C2G38_1291956
Putative 5-3 exonuclease.
    
 0.773
C2G38_1292045
XRN1_D2_D3 domain-containing protein.
    
 0.773
C2G38_1291930
Uncharacterized protein.
    
 0.773
C2G38_1970017
14-3-3 protein; Belongs to the 14-3-3 family.
    
 0.750
C2G38_2033693
14-3-3 1 protein; Belongs to the 14-3-3 family.
    
 0.750
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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