Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C2G38_2116684Rad60-SLD domain-containing protein. (466 aa)    
Predicted Functional Partners:
C2G38_2101156
Zinc-finger of the MIZ type in Nse subunit-domain-containing protein.
    
 
 0.915
C2G38_1976471
Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.887
C2G38_2057689
Ubiquitin-like protein pmt3/smt3.
    
 
 0.864
C2G38_2006216
ERCC4 domain-containing protein.
    
 
 0.798
C2G38_1972122
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
    
 
 0.795
C2G38_715375
DNA polymerase subunit Cdc27-domain-containing protein.
    
 
 0.793
C2G38_1986877
GIY-YIG domain-containing protein.
    
   0.791
C2G38_54950
GIY-YIG domain-containing protein.
    
   0.791
C2G38_1969353
GIY-YIG domain-containing protein.
    
   0.791
C2G38_1965668
ERCC4 domain-containing protein.
    
 
 0.779
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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