Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2123394F-box domain-containing protein. (362 aa)    
Predicted Functional Partners:
C2G38_1996271
Uncharacterized protein.
    
 0.946
C2G38_1272978
Uncharacterized protein.
   
 0.795
C2G38_1915047
Tim10/DDP family zinc finger-domain-containing protein.
   
 0.729
C2G38_2015884
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 
 0.679
C2G38_1987904
JAB1/Mov34/MPN/PAD-1 ubiquitin protease-domain-containing protein.
    
   0.662
C2G38_1921708
Tim10/DDP family zinc finger protein; Belongs to the small Tim family.
   
 
 0.640
C2G38_1968919
Tim10/DDP family zinc finger protein.
    
 0.596
C2G38_1954738
Tim10/DDP family zinc finger-domain-containing protein; Belongs to the small Tim family.
     
 0.595
C2G38_2253850
Uncharacterized protein.
   
 
 0.521
C2G38_2181844
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
  
 0.499
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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