STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_22258672-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Belongs to the metallo-dependent hydrolases superfamily. (371 aa)    
Predicted Functional Partners:
C2G38_2036621
3-hydroxyanthranilic acid dioxygenase-domain-containing protein.
  
 
 0.932
C2G38_2209587
ULP_PROTEASE domain-containing protein.
    
 0.812
C2G38_2005353
Chaperonin 10-like protein.
  
 
  0.701
C2G38_1391196
Chaperonin 10-like protein.
  
 
  0.701
C2G38_2243913
Malonyl-CoA decarboxylase-domain-containing protein.
    
 0.687
C2G38_2220945
ADH_N domain-containing protein.
  
 
  0.678
C2G38_2138981
Fungal-specific transcription factor domain-containing protein.
  
 
  0.678
C2G38_2043199
Uncharacterized protein.
    
 0.662
C2G38_2206217
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase.
    
 0.662
C2G38_2244471
Ferredoxin.
    
 0.662
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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