STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1985696Putative deacetylase LmbE-like domain-containing protein. (302 aa)    
Predicted Functional Partners:
C2G38_1962846
Cysteinyl-tRNA synthetase.
  
 
 0.839
C2G38_2209587
ULP_PROTEASE domain-containing protein.
    
 0.787
C2G38_1953871
GPI-GlcNAc transferase complex, PIG-H component-domain-containing protein.
   
 
 0.774
C2G38_1975970
Phosphatidylinositol N-acetylglucosaminyltransferase subunit C.
     
 0.761
C2G38_2170310
PIG-P domain-containing protein.
     
 0.761
C2G38_159585
N-acetylglucosaminyl transferase component-domain-containing protein.
     
 0.757
C2G38_1974325
Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.
     
 0.747
C2G38_2235649
Uncharacterized protein.
     
 0.735
C2G38_2188702
N-acetylglucosamine-6-phosphate deacetylase; Belongs to the metallo-dependent hydrolases superfamily. NagA family.
     
 0.735
C2G38_1976786
Glycosyltransferase Family 4 protein.
  
 
 0.724
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.