STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2116328Uncharacterized protein. (487 aa)    
Predicted Functional Partners:
C2G38_2207498
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 0.672
C2G38_1882266
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 0.672
C2G38_2014478
Uncharacterized protein.
    
 0.672
C2G38_2014230
Uncharacterized protein.
    
 0.672
C2G38_2030591
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 0.672
C2G38_2228331
RING-type domain-containing protein.
    
  0.589
C2G38_1989354
Cullin; Belongs to the cullin family.
    
  0.553
C2G38_2218807
Cullin; Belongs to the cullin family.
    
  0.553
C2G38_2190935
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
  0.553
C2G38_1043944
Cullin repeat-like-containing domain protein; Belongs to the cullin family.
    
  0.553
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.