STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2149542tRNA-synt_His domain-containing protein. (224 aa)    
Predicted Functional Partners:
C2G38_1980146
Eukaryotic translation initiation factor 2 alpha subunit-domain-containing protein.
   
 0.865
C2G38_2168108
Uncharacterized protein.
  
 0.862
C2G38_2195331
Histidine biosynthesis trifunctional protein.
    
 0.837
C2G38_2051106
Tyrosine--tRNA ligase.
  
 
 0.728
C2G38_1971213
tRNA synthetases class II-domain-containing protein.
  
  
 0.673
C2G38_1973597
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.662
C2G38_2217173
Kinase-like domain-containing protein.
     
 0.654
C2G38_1128976
Uncharacterized protein.
   
 0.649
C2G38_1993671
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.623
C2G38_2201059
Raptor N-terminal caspase like domain-containing protein.
    
 0.614
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.