Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2219095Ribosomal protein L49/IMG2. (106 aa)    
Predicted Functional Partners:
C2G38_1985294
Thioredoxin-like protein.
   
 
 0.989
C2G38_2105528
Uncharacterized protein.
   
 
 0.974
C2G38_1927866
Uncharacterized protein.
   
 
 0.972
C2G38_1975761
Translation protein SH3-like domain-containing protein.
   
 
 0.971
C2G38_1991032
Mitochondrial ribosomal protein L37-domain-containing protein.
   
 
 0.969
C2G38_2037150
L51_S25_CI-B8 domain-containing protein.
   
   0.966
C2G38_2019120
Ribosomal protein L22/L17; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.963
C2G38_2204396
Ribosomal protein L18e/L15P.
   
 
 0.961
C2G38_1540132
Ribosomal protein L7/L12 C-terminal domain-containing protein.
   
 
 0.961
C2G38_2165928
Mitochondrial ribosomal death-associated protein 3-domain-containing protein.
   
 
 0.960
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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