Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
Experiments
Databases
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[Homology]
Score
C2G38_2253850Uncharacterized protein. (165 aa)    
Predicted Functional Partners:
C2G38_1985551
Eukaryotic porin/Tom40.
   
 0.855
C2G38_1984351
ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]
   
 
 0.805
C2G38_1996271
Uncharacterized protein.
   
 0.792
C2G38_2188524
J domain-containing protein.
   
 
 0.763
C2G38_1958299
Cytochrome c oxidase subunit IV.
   
  
 0.745
C2G38_2133577
Cytochrome c oxidase subunit VIb.
   
 
 0.714
C2G38_2209938
CHCH domain-containing protein.
   
 
 0.711
C2G38_1732417
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
    0.702
C2G38_2198179
Cytochrome c oxidase subunit 6A, mitochondrial.
   
   0.697
C2G38_2012665
Cytochrome c oxidase subunit VIIc.
   
    0.680
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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