STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1989074Domain of Kin17 curved DNA-binding protein. (209 aa)    
Predicted Functional Partners:
C2G38_1982989
RRM domain-containing protein.
   
   0.874
C2G38_1988888
CPSF A subunit region-domain-containing protein.
    
   0.850
C2G38_2151350
Matrin-type domain-containing protein.
    
 
 0.843
C2G38_1983445
Matrin-type domain-containing protein.
    
 
 0.842
C2G38_2156242
Sec63 Brl domain-containing protein.
    
   0.819
C2G38_2202603
WD40-repeat-containing domain protein.
   
   0.813
C2G38_2213095
Splicing factor 3B subunit 1.
    
   0.806
C2G38_2042099
Uncharacterized protein.
    
   0.806
C2G38_2029301
Small nuclear ribonucleoprotein-associated protein.
    
   0.791
C2G38_2231741
U1-type domain-containing protein.
   
 
 0.741
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.