STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2275689PAP-associated domain-containing protein. (242 aa)    
Predicted Functional Partners:
C2G38_2048760
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.630
C2G38_2122479
Uncharacterized protein.
    
 
 0.602
C2G38_2144769
Uncharacterized protein.
   
 0.590
C2G38_2034827
Uncharacterized protein.
   
 0.590
C2G38_2088055
ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family.
    
  0.584
C2G38_2132359
Translation initiation factor eIF 4e-like domain-containing protein; Belongs to the eukaryotic initiation factor 4E family.
    
  0.581
C2G38_2132032
DEAD-domain-containing protein; Belongs to the DEAD box helicase family.
    
  0.580
C2G38_2254369
RRM domain-containing protein.
    
  0.574
C2G38_2034319
Uncharacterized protein.
   
 
  0.529
C2G38_1991514
4-nitrophenylphosphatase.
     
 0.524
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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