Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C2G38_2048343Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (219 aa)    
Predicted Functional Partners:
C2G38_288634
Pseudouridine synthase.
  
 0.999
C2G38_1948123
H/ACA ribonucleo protein complex, subunit Nop10.
   
 0.999
C2G38_2133456
Fibrillarin-domain-containing protein.
   
 0.998
C2G38_2008666
Nop domain-containing protein.
   
 0.996
C2G38_2131708
Nop domain-containing protein.
   
 0.996
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.987
C2G38_2132741
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 0.986
C2G38_2022330
Pseudouridine synthase.
  
 0.984
C2G38_2076133
Pseudouridine synthase.
  
 0.984
C2G38_2000493
Noc2p family-domain-containing protein.
   
 
 0.983
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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