Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2112651Sortilin. (2103 aa)    
Predicted Functional Partners:
C2G38_2209540
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.906
C2G38_2071806
Putative PEP8-vacuolar protein sorting/targeting protein.
    
 
 0.888
C2G38_2041894
Vps5 C terminal like-domain-containing protein.
    
 0.736
C2G38_362269
Uncharacterized protein.
    
 0.683
C2G38_2017696
Vps5 C terminal like-domain-containing protein.
    
 0.654
C2G38_2046929
Uncharacterized protein.
    
 0.641
C2G38_2211011
Uncharacterized protein.
    
 0.641
C2G38_2192460
Uncharacterized protein.
    
 0.641
C2G38_2037643
Uncharacterized protein.
    
 0.641
C2G38_2179754
Uncharacterized protein.
    
 0.641
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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