STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2112725Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1194 aa)    
Predicted Functional Partners:
C2G38_2244508
Uncharacterized protein.
    
 0.827
C2G38_2124208
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
0.659
C2G38_1994952
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 
 0.627
C2G38_1511500
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 
 0.627
C2G38_2032422
Synaptobrevin-like protein ykt6; Belongs to the synaptobrevin family.
 
      0.564
C2G38_2228028
E1-E2 ATPase-domain-containing protein.
  
 
 0.560
C2G38_1990941
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
   
 0.554
C2G38_2256399
SWIRM domain-containing protein.
    
  0.547
C2G38_608220
CDC50/LEM3 family; Belongs to the CDC50/LEM3 family.
    
  0.547
C2G38_2218321
CDC50 family protein; Belongs to the CDC50/LEM3 family.
    
  0.547
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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